| plotDiagram {GCDkit} | R Documentation |
Plots the classification diagram, stored in the Figaro style sheet.
plotDiagram(diagram,select.samples=TRUE,new=TRUE,main=NULL,width=6.5,height=6.5,pointsize=10,
bg="transparent",autoscale=TRUE,interactive=FALSE,...)
diagram |
a valid name of the classification diagram. See details. |
main |
optional alternative main title to the diagram. |
select.samples |
logical; should be invoked the dialogue for selecting samples? |
new |
logical; should be opened a new plotting window? |
width, height |
dimensions of the plotting window in inches. |
pointsize |
the default pointsize of plotted text, interpreted as big points (1/72 inch). |
bg |
plotting window background colour. |
autoscale |
logical; when some data fall outside the plot, display a dialogue to autoscale? |
interactive |
logical; for internal use by our French colleagues. |
... |
optional parameters to the plotting function |
The argument 'diagram' may acquire one of following values:
'AFM', 'Miyashiro', 'PeceTaylor', 'Hastie', 'NaAlK',
'Shand', 'TAS', 'CoxVolc', 'TASMiddlemostVolc',
'Jensen', 'LarocheVolc', 'WinFloyd1',
'Pearce1996', 'WinFloyd2', 'QAPFVolc', 'OConnorVolc',
'CoxPlut', 'TASMiddlemostPlut', 'LarochePlut', 'DebonPQ',
'DebonBA', 'Villaseca', 'MiddlemostPlut', 'QAPFPlut',
'QANOR', 'Enrique', 'OConnorPlut',
'Batchelor', 'LaurentSource', 'Harris',
'Sylvester', 'LaYb', 'Meschede', 'Mullen', 'Norry',
'Shervais', 'PearceEtAl', 'Pearce1982', 'Hollocher1',
'Hollocher2', 'Ross','PearceNbThYb', 'PearceNbTiYb',
'Cabanis', 'OhtaArai'.
NB that this list can be shorter, reflecting the data available for plotting; it would also include any user-defined diagrams.
If some analyses plot outside the limits, a warning is shown, and the diagram can be rescaled.
none
Vojtěch Erban, erban@sopky.cz
classify, figaro,
AFM, Miyashiro,
PeceTaylor, Hastie,
NaAlK, Shand,
TAS, Cox,
TASMiddlemost, Jensen,
LaRoche, WinFloyd1,
Pearce1996, WinFloyd2,
QAPF, OConnor,
DebonPQ, DebonBA,
Villaseca, Middlemost,
QANOR, Enrique,
Batchelor, LaurentSource,
Harris, Sylvester,
LaYb, Meschede,
Mullen, Norry,
Shervais, PearceEtAl,
Pearce1982, Hollocher1,
Hollocher2, PearceNbThYb,
PearceNbTiYb, Ross,
OhtaArai, Cabanis,
PearceDestructive1, PearceDestructive2,
PearceDestructive3, Paulick,
DebonKNaB, DebonQB,
DebonBMgNo, DebonBQF,
Grebennikov.
sampleDataset("atacazo")
plotDiagram("TAS",FALSE)
print(.claslist())
print(.tectlist())
print(.userlist())